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XSIM Legacy Models Page

This page allows users to run several popular XSIM legacy models from the JSim Fortran Package (fpack) under JSim. To run these models online, you must have a Java plugin installed in your WWW browser. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since these models do not specify simulation time length or delta, these must be set by the user before running the model.

Return to complete JSim model archives.

Currently available models

msid4 multi-path, multi-indicator, multi-species, four-region organ
demo demonstration model showing decaying trig functions
mhed carbon11--meta-hydroxyephedrine transport
btex40 four-region, distributed blood-tissue exchange
btex20 two-region, distributed blood-tissue exchange
gentex multi-path, multi-species, five region organ model with nonlinear transmembrane transport, nonlinear reactions and time-varying blood flow and volume
gentex2 restricted version of gentex model
mmid4 multi-path, multi-indicator, four-region organ model
body whole-body recirculation model with multiple organs

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.